Dye-decolorizing peroxidases in Irpex lacteus combining the catalytic properties of heme peroxidases and laccase play important roles in ligninolytic system.
Identifieur interne : 000446 ( Main/Exploration ); précédent : 000445; suivant : 000447Dye-decolorizing peroxidases in Irpex lacteus combining the catalytic properties of heme peroxidases and laccase play important roles in ligninolytic system.
Auteurs : Xing Qin [République populaire de Chine] ; Huiying Luo [République populaire de Chine] ; Xiaoyu Zhang [République populaire de Chine] ; Bin Yao [République populaire de Chine] ; Fuying Ma [République populaire de Chine] ; Xiaoyun Su [République populaire de Chine]Source :
- Biotechnology for biofuels [ 1754-6834 ] ; 2018.
Abstract
Background
The white rot fungus
Results
Based on the extracellular enzyme activities and secretome analysis,
Conclusions
The results proved for the first time that DyPs depolymerized lignin individually, combining catalytic features of different peroxidases on the functional level. Therefore, DyPs may be considered an important part of ligninolytic system in wood-decaying fungi.
DOI: 10.1186/s13068-018-1303-9
PubMed: 30455731
PubMed Central: PMC6223037
Affiliations:
Links toward previous steps (curation, corpus...)
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Xing" uniqKey="Qin X" first="Xing" last="Qin">Xing Qin</name><affiliation wicri:level="3"><nlm:affiliation>1Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074 China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>1Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation><affiliation wicri:level="3"><nlm:affiliation>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing, 100081 China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Luo, Huiying" sort="Luo, Huiying" uniqKey="Luo H" first="Huiying" last="Luo">Huiying Luo</name><affiliation wicri:level="3"><nlm:affiliation>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing, 100081 China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Zhang, Xiaoyu" sort="Zhang, Xiaoyu" uniqKey="Zhang X" first="Xiaoyu" last="Zhang">Xiaoyu Zhang</name><affiliation wicri:level="3"><nlm:affiliation>1Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074 China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>1Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author><author><name sortKey="Yao, Bin" sort="Yao, Bin" uniqKey="Yao B" first="Bin" last="Yao">Bin Yao</name><affiliation wicri:level="3"><nlm:affiliation>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing, 100081 China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author><author><name sortKey="Ma, Fuying" sort="Ma, Fuying" uniqKey="Ma F" first="Fuying" last="Ma">Fuying Ma</name><affiliation wicri:level="3"><nlm:affiliation>1Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074 China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>1Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan</wicri:regionArea><placeName><settlement type="city">Wuhan</settlement><region type="région">Hubei</region></placeName></affiliation></author><author><name sortKey="Su, Xiaoyun" sort="Su, Xiaoyun" uniqKey="Su X" first="Xiaoyun" last="Su">Xiaoyun Su</name><affiliation wicri:level="3"><nlm:affiliation>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing, 100081 China.</nlm:affiliation><country xml:lang="fr">République populaire de Chine</country><wicri:regionArea>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing</wicri:regionArea><placeName><settlement type="city">Pékin</settlement></placeName></affiliation></author></analytic><series><title level="j">Biotechnology for biofuels</title><idno type="ISSN">1754-6834</idno><imprint><date when="2018" type="published">2018</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p><b>Background</b></p><p>The white rot fungus </p></div><div type="abstract" xml:lang="en"><p><b>Results</b></p><p>Based on the extracellular enzyme activities and secretome analysis, </p></div><div type="abstract" xml:lang="en"><p><b>Conclusions</b></p><p>The results proved for the first time that DyPs depolymerized lignin individually, combining catalytic features of different peroxidases on the functional level. Therefore, DyPs may be considered an important part of ligninolytic system in wood-decaying fungi.</p></div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">30455731</PMID><DateRevised><Year>2020</Year><Month>09</Month><Day>30</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1754-6834</ISSN><JournalIssue CitedMedium="Print"><Volume>11</Volume><PubDate><Year>2018</Year></PubDate></JournalIssue><Title>Biotechnology for biofuels</Title><ISOAbbreviation>Biotechnol Biofuels</ISOAbbreviation></Journal><ArticleTitle>Dye-decolorizing peroxidases in <i>Irpex lacteus</i> combining the catalytic properties of heme peroxidases and laccase play important roles in ligninolytic system.</ArticleTitle><Pagination><MedlinePgn>302</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1186/s13068-018-1303-9</ELocationID><Abstract><AbstractText Label="Background" NlmCategory="UNASSIGNED">The white rot fungus <i>Irpex lacteus</i> exhibits a great potential in biopretreatment of lignocellulose as well as in biodegradation of xenobiotic compounds by extracellular ligninolytic enzymes. Among these enzymes, the possible involvement of dye-decolorizing peroxidase (DyP) in lignin degradation is not clear yet.</AbstractText><AbstractText Label="Results" NlmCategory="UNASSIGNED">Based on the extracellular enzyme activities and secretome analysis, <i>I. lacteus</i> CD2 produced DyPs as the main ligninolytic enzymes when grown in Kirk's medium supplemented with lignin. Further transcriptome analysis revealed that induced transcription of genes encoding DyPs was accompanied by the increased expression of transcripts for H<sub>2</sub>O<sub>2</sub>-generating enzymes such as alcohol oxidase, pyranose 2-oxidase, and glyoxal oxidases. Meanwhile, accumulation of transcripts for glycoside hydrolase and protease was observed, in agreement with abundant proteins. Moreover, the biochemical analysis of <i>Il</i>DyP2 and <i>Il</i>DyP1 confirmed that DyPs were able to catalyze the oxidation of typical peroxidases substrates ABTS, phenolic lignin compounds DMP, and guaiacol as well as non-phenolic lignin compound, veratryl alcohol. More importantly, <i>Il</i>DyP1 enhanced catalytic activity for veratryl alcohol oxidation in the presence of mediator 1-hydroxybenzotriazole, which was similar to the laccase/1-hydroxybenzotriazole system.</AbstractText><AbstractText Label="Conclusions" NlmCategory="UNASSIGNED">The results proved for the first time that DyPs depolymerized lignin individually, combining catalytic features of different peroxidases on the functional level. Therefore, DyPs may be considered an important part of ligninolytic system in wood-decaying fungi.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Qin</LastName><ForeName>Xing</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>1Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074 China.</Affiliation><Identifier Source="ISNI">0000 0004 0368 7223</Identifier><Identifier Source="GRID">grid.33199.31</Identifier></AffiliationInfo><AffiliationInfo><Affiliation>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing, 100081 China.</Affiliation><Identifier Source="ISNI">0000 0001 0526 1937</Identifier><Identifier Source="GRID">grid.410727.7</Identifier></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Luo</LastName><ForeName>Huiying</ForeName><Initials>H</Initials><AffiliationInfo><Affiliation>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing, 100081 China.</Affiliation><Identifier Source="ISNI">0000 0001 0526 1937</Identifier><Identifier Source="GRID">grid.410727.7</Identifier></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhang</LastName><ForeName>Xiaoyu</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>1Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074 China.</Affiliation><Identifier Source="ISNI">0000 0004 0368 7223</Identifier><Identifier Source="GRID">grid.33199.31</Identifier></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Yao</LastName><ForeName>Bin</ForeName><Initials>B</Initials><AffiliationInfo><Affiliation>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing, 100081 China.</Affiliation><Identifier Source="ISNI">0000 0001 0526 1937</Identifier><Identifier Source="GRID">grid.410727.7</Identifier></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ma</LastName><ForeName>Fuying</ForeName><Initials>F</Initials><Identifier Source="ORCID">0000-0002-7891-8124</Identifier><AffiliationInfo><Affiliation>1Department of Biotechnology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, 430074 China.</Affiliation><Identifier Source="ISNI">0000 0004 0368 7223</Identifier><Identifier Source="GRID">grid.33199.31</Identifier></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Su</LastName><ForeName>Xiaoyun</ForeName><Initials>X</Initials><AffiliationInfo><Affiliation>2Key Laboratory for Feed Biotechnology of the Ministry of Agriculture, Feed Research Institute, Chinese Academy of Agricultural Sciences, No. 12 South Zhongguancun Street, Beijing, 100081 China.</Affiliation><Identifier Source="ISNI">0000 0001 0526 1937</Identifier><Identifier Source="GRID">grid.410727.7</Identifier></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2018</Year><Month>11</Month><Day>08</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Biotechnol Biofuels</MedlineTA><NlmUniqueID>101316935</NlmUniqueID><ISSNLinking>1754-6834</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Dye-decolorizing peroxidase</Keyword><Keyword MajorTopicYN="N">Irpex lacteus</Keyword><Keyword MajorTopicYN="N">Lignin biodegradation</Keyword><Keyword MajorTopicYN="N">Mediator</Keyword><Keyword MajorTopicYN="N">White rot fungi</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2018</Year><Month>09</Month><Day>03</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2018</Year><Month>10</Month><Day>26</Day></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2018</Year><Month>11</Month><Day>21</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2018</Year><Month>11</Month><Day>21</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2018</Year><Month>11</Month><Day>21</Day><Hour>6</Hour><Minute>1</Minute></PubMedPubDate></History><PublicationStatus>epublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">30455731</ArticleId><ArticleId IdType="doi">10.1186/s13068-018-1303-9</ArticleId><ArticleId IdType="pii">1303</ArticleId><ArticleId IdType="pmc">PMC6223037</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>J Proteome Res. 2008 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uniqKey="Ma F" first="Fuying" last="Ma">Fuying Ma</name><name sortKey="Qin, Xing" sort="Qin, Xing" uniqKey="Qin X" first="Xing" last="Qin">Xing Qin</name><name sortKey="Su, Xiaoyun" sort="Su, Xiaoyun" uniqKey="Su X" first="Xiaoyun" last="Su">Xiaoyun Su</name><name sortKey="Yao, Bin" sort="Yao, Bin" uniqKey="Yao B" first="Bin" last="Yao">Bin Yao</name><name sortKey="Zhang, Xiaoyu" sort="Zhang, Xiaoyu" uniqKey="Zhang X" first="Xiaoyu" last="Zhang">Xiaoyu Zhang</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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